Class RnaplotHelper

RnaplotHelper handles generation of svg visualizations of predicted structures using RNAplot

Namespace: DispatchModule\Helpers
Located at DispatchModule/helpers/RnaplotHelper.php

Methods summary
`public static`	# `deleteRnaplotFiles( string $rnaplotTemp, integer $maxfiles )` Deletes all rna plot svg files - if there's more than maximum limit (see maxRnaPlotSvgStored in config) Deletes all rna plot svg files - if there's more than maximum limit (see maxRnaPlotSvgStored in config) Parameters `$rnaplotTemp` path to rna plot temporary dir `$maxfiles` maximum ammount of files to keep or -1 for infinity
`public static`	# `generateRnaplot( string $rnaplotTemp, string $idString, string $sequence, string $prediction, integer $maxfiles = 200 )` Genereates RNAplot svg file Genereates RNAplot svg file Parameters `$rnaplotTemp` path to rna plot temporary dir `$idString` svg name `$sequence` whole sequence `$prediction` predicted structure in dot-parent notation `$maxfiles` max svg files to keep in temporary storage (-1 for infinity) Throws `BaseModule\Exceptions\BaseException`