Overview

Namespaces

  • AnalyseModule
    • Models
  • BaseModule
    • Exceptions
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    • Helpers
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  • PredictModule
  • SearchModule

Classes

  • BaseMatch
  • BaseParser
  • BlastMatch
  • BlatMatch
  • PredictParser
  • ResultSet
  • SearchParser
  • Sequence
  • Overview
  • Namespace
  • Class

Class BlastMatch

Match is an envelope holding information about one specific match

DispatchModule\BaseMatch
Extended by DispatchModule\BlastMatch
Namespace: DispatchModule
Located at DispatchModule/BlastMatch.php
Methods summary
public
# __construct( )

Constructor to initialize superclass

Constructor to initialize superclass

Overrides

DispatchModule\BaseMatch::__construct()
public
# setEValue( float $eValue )

Sets the E-value of the match

Sets the E-value of the match

Parameters

$eValue
e-value
public
# setScore( integer $score )

Sets the score of the match

Sets the score of the match

Parameters

$score
score
public
# setBitScore( integer $bitScore )

Sets the bit-score of the match

Sets the bit-score of the match

Parameters

$bitScore
bit-score
Methods inherited from DispatchModule\BaseMatch
getCoverage(), getIdentity(), getScore(), setCoverage(), setIdentity()
Properties inherited from DispatchModule\BaseMatch
$dbStartPosition, $dbStopPosition, $label, $queryStartPosition, $queryStopPosition, $scores, $subsequence
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