Class Cppredict2Tool

Cppredict2 tool

Nette\Object

Extended by

BaseModule\Services\BaseService

Extended by

DispatchModule\Tools\BaseTool

Extended by

DispatchModule\Tools\Cppredict2Tool implements DispatchModule\Tools\ToolInterface

Namespace: DispatchModule\Tools
Located at DispatchModule/predictTools/Cppredict2Tool.php

Methods summary
`public`	# `__construct( Nette\DI\Container $container )` Constructor used to save container Constructor used to save container Parameters `$container` Overrides `BaseModule\Services\BaseService::__construct()`
`public boolean`	# `addCriteria( string $name, mixed $value )` Adds search criteria Adds search criteria Parameters `$name` `$value` Returns boolean Implementation of `DispatchModule\Tools\ToolInterface::addCriteria()`
`public ResultSet`	# `execute( )` Executes query Executes query Returns ResultSet Implementation of `DispatchModule\Tools\ToolInterface::execute()`
`public string`	# `getLabel( )` Gets human-readable short description (name) of the tool Gets human-readable short description (name) of the tool Returns string human-readable short description of the tools Implementation of `DispatchModule\Tools\ToolInterface::getLabel()`

Methods inherited from DispatchModule\Tools\BaseTool
`getName(), getWantedParameters(), requireParameter(), used()`

Properties summary
`protected string`	`$header` fast file header fast file header	# `'> no header'`
`protected string`	`$sequence` input sequence input sequence	#
`protected string`	`$template` path to template path to template	#
`protected boolean`	`$zscore` compute z-score compute z-score	# `false`
`protected string`	`$templates` path to template path to template	# `array()`
`protected string`	`$inputFile` path to template path to template	# `'input.fasta'`
`protected string`	`$validatedFile` path to template path to template	# `'validated.fasta'`
`protected array`	`$wantedParameters` array of wanted parameters array of wanted parameters	#
`public string`	`$description` short description of the tool short description of the tool	# `'Cppredict2 is a custom rRNA prediction tool that returns the predicted structure in dot-parent notation.'`

Properties inherited from DispatchModule\Tools\BaseTool
`$completeData, $fileName`

Properties inherited from BaseModule\Services\BaseService
`$container`