Class BlastXMLParser

Blast XML Parser parses XML document generated by Blast

DispatchModule\Models\BlastXMLParser

Namespace: DispatchModule\Models
Located at DispatchModule/models/BlastXMLParser.php

Methods summary
`public`	# `__construct( string $fileName )` Constructor - creates FileModel instance Constructor - creates FileModel instance Parameters `$fileName` name of the file
`public String`	# `getFileName( )` Get XML file name (including rel. path) Get XML file name (including rel. path) Returns String
`public`	# `deleteFile( )` Removes file Removes file
`public`	# `setMinCoverage( integer $minCoverage )` Sets minimal required coverage Sets minimal required coverage Parameters `$minCoverage` $minMatch
`public`	# `setMinIdentity( integer $minIdentity )` Sets minimal required identity Sets minimal required identity Parameters `$minIdentity` $minMatch
`public DispatchModule\ResultSet`	# `execute( )` Parses Blast XML and return the result set Parses Blast XML and return the result set Returns `DispatchModule\ResultSet` Result set of sequences
`public`	# `tagStart( parser $parser, string $elementName, array $attributes )` XML node start XML node start Parameters `$parser` `$elementName` `$attributes`
`public`	# `tagEnd( parser $parser, string $elementName )` XML node end XML node end Parameters `$parser` `$elementName`
`public`	# `chars( parser $parser, string $data )` Processing of the element Processing of the element Parameters `$parser` `$data`